Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
O00370 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
O00370 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
O00370 MIR600HG-201ENST00000449175 5984 ntBASIC15.69■□□□□ 0.1
O00370 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.69■□□□□ 0.1
O00370 AC139712.1-201ENST00000378256 1875 ntBASIC15.69■□□□□ 0.1
O00370 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
O00370 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
O00370 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
O00370 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
O00370 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.68■□□□□ 0.1
O00370 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.68■□□□□ 0.1
O00370 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.68■□□□□ 0.1
O00370 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
O00370 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
O00370 FAM21FP-201ENST00000426241 1131 ntBASIC15.68■□□□□ 0.1
O00370 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.68■□□□□ 0.1
O00370 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.68■□□□□ 0.1
O00370 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
O00370 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 AL136301.1-201ENST00000615830 422 ntBASIC15.68■□□□□ 0.1
O00370 AC009542.2-202ENST00000619004 1067 ntBASIC15.68■□□□□ 0.1
O00370 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
O00370 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
O00370 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
O00370 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 AL365209.1-201ENST00000624418 6473 ntBASIC15.68■□□□□ 0.1
O00370 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.68■□□□□ 0.1
O00370 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.68■□□□□ 0.1
O00370 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.68■□□□□ 0.1
O00370 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
O00370 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.67■□□□□ 0.1
O00370 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 MBLAC2-202ENST00000514906 1936 ntBASIC15.67■□□□□ 0.1
O00370 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.67■□□□□ 0.1
O00370 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.67■□□□□ 0.1
O00370 AC100850.1-201ENST00000506768 649 ntBASIC15.67■□□□□ 0.1
O00370 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
O00370 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.67■□□□□ 0.1
O00370 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.67■□□□□ 0.1
O00370 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.67■□□□□ 0.1
O00370 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
O00370 EEF1DP1-201ENST00000585891 896 ntBASIC15.67■□□□□ 0.1
O00370 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.67■□□□□ 0.1
O00370 AL359881.2-201ENST00000602973 570 ntBASIC15.67■□□□□ 0.1
O00370 AC008825.2-201ENST00000603374 718 ntBASIC15.67■□□□□ 0.1
O00370 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.67■□□□□ 0.1
O00370 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.67■□□□□ 0.1
O00370 SHC1P1-201ENST00000425230 1745 ntBASIC15.67■□□□□ 0.1
O00370 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.67■□□□□ 0.1
O00370 AC015688.4-201ENST00000580780 1647 ntBASIC15.67■□□□□ 0.1
O00370 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
O00370 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 AC012617.1-204ENST00000586340 2305 ntBASIC15.67■□□□□ 0.1
O00370 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC15.67■□□□□ 0.1
O00370 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
O00370 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
O00370 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
O00370 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms