Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
MBD1Q9UIS9 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.73□□□□□ -0.05
MBD1Q9UIS9 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
MBD1Q9UIS9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.73□□□□□ -0.05
MBD1Q9UIS9 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.73□□□□□ -0.05
MBD1Q9UIS9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AP000356.3-201ENST00000382243 753 ntBASIC14.72□□□□□ -0.05
MBD1Q9UIS9 RPS9P1-201ENST00000419943 583 ntBASIC14.72□□□□□ -0.05
MBD1Q9UIS9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 PGAM1P5-201ENST00000548011 764 ntBASIC14.72□□□□□ -0.05
MBD1Q9UIS9 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 MIR6769A-201ENST00000617340 73 ntBASIC14.72□□□□□ -0.05
MBD1Q9UIS9 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
MBD1Q9UIS9 AP001267.2-201ENST00000532619 2086 ntBASIC14.72□□□□□ -0.05
MBD1Q9UIS9 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.72□□□□□ -0.05
MBD1Q9UIS9 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 FRMPD2B-201ENST00000431305 1347 ntBASIC14.71□□□□□ -0.05
MBD1Q9UIS9 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 PFN2-202ENST00000423691 911 ntTSL 2 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 RPL13AP19-201ENST00000434320 584 ntBASIC14.71□□□□□ -0.05
MBD1Q9UIS9 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 AC131206.1-201ENST00000538078 1211 ntBASIC14.71□□□□□ -0.05
MBD1Q9UIS9 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.71□□□□□ -0.05
MBD1Q9UIS9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.06
MBD1Q9UIS9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
MBD1Q9UIS9 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
MBD1Q9UIS9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 AC015909.3-201ENST00000572855 1794 ntBASIC14.7□□□□□ -0.06
MBD1Q9UIS9 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
MBD1Q9UIS9 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms