Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.08■□□□□ 0.33
SLF1Q9BQI6 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AL645933.1-201ENST00000440087 609 ntBASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AC134698.3-201ENST00000523880 214 ntBASIC17.08■□□□□ 0.32
SLF1Q9BQI6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AC090857.1-201ENST00000527400 390 ntBASIC17.08■□□□□ 0.32
SLF1Q9BQI6 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 FGD5P1-202ENST00000614866 2498 ntBASIC17.08■□□□□ 0.32
SLF1Q9BQI6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLF1Q9BQI6 AC139749.1-202ENST00000617529 3139 ntBASIC17.07■□□□□ 0.32
SLF1Q9BQI6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AC007274.2-201ENST00000421675 662 ntBASIC17.07■□□□□ 0.32
SLF1Q9BQI6 ISCA2P1-201ENST00000425548 448 ntBASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AC078875.1-201ENST00000431907 724 ntBASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AC006335.1-201ENST00000445200 547 ntBASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
SLF1Q9BQI6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 ELK2AP-201ENST00000392510 1007 ntBASIC17.06■□□□□ 0.32
SLF1Q9BQI6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AC006122.1-201ENST00000493323 440 ntBASIC17.06■□□□□ 0.32
SLF1Q9BQI6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AF254983.2-201ENST00000612331 135 ntBASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AC079336.7-201ENST00000623428 1078 ntBASIC17.06■□□□□ 0.32
SLF1Q9BQI6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLF1Q9BQI6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms