Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AC007969.1-201ENST00000433675 447 ntBASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AC093004.1-201ENST00000508850 424 ntBASIC12.89□□□□□ -0.35
CPNE2Q96FN4 DOC2GP-202ENST00000514950 1163 ntBASIC12.89□□□□□ -0.35
CPNE2Q96FN4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AC092364.2-202ENST00000597012 1073 ntBASIC12.89□□□□□ -0.35
CPNE2Q96FN4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AC118758.2-201ENST00000614242 2813 ntBASIC12.89□□□□□ -0.35
CPNE2Q96FN4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
CPNE2Q96FN4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 PNMT-202ENST00000394246 821 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 BASP1P1-201ENST00000430708 665 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC055876.2-201ENST00000531834 546 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC104794.3-201ENST00000566840 1248 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC120045.2-201ENST00000567334 178 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 AP001160.2-201ENST00000596071 487 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 CSPG4P11-201ENST00000560634 4910 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 CR383656.2-201ENST00000548656 2254 ntBASIC12.88□□□□□ -0.35
CPNE2Q96FN4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.88□□□□□ -0.35
CPNE2Q96FN4 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms