Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 AC015911.4-201ENST00000588022 1070 ntBASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 RPL28-205ENST00000558131 444 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.81□□□□□ -0.36
CCDC107Q8WV48 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms