Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FNDC9Q8TBE3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 MIR663B-201ENST00000408361 115 ntBASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AL022328.3-201ENST00000607943 679 ntBASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AL008638.5-201ENST00000623814 1298 ntBASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FNDC9Q8TBE3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 LINC00552-201ENST00000625151 2579 ntBASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.28□□□□□ -0.28
FNDC9Q8TBE3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms