Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 AC108734.2-201ENST00000420887 1069 ntBASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 PSMD4P1-201ENST00000433951 1109 ntBASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 TRMT112P3-201ENST00000580149 358 ntBASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 DBP-202ENST00000593500 712 ntTSL 2 BASIC13.21□□□□□ -0.29
TNRC6AQ8NDV7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TNRC6AQ8NDV7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 ACE3P-201ENST00000423435 1973 ntBASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AC010234.1-201ENST00000494599 870 ntBASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AP000322.3-201ENST00000608665 388 ntBASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 BRD7P5-201ENST00000299197 1822 ntBASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 CICP24-201ENST00000605464 2705 ntBASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TNRC6AQ8NDV7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms