Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 MBLAC2-202ENST00000514906 1936 ntBASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CCDC83Q8IWF9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 RN7SKP175-201ENST00000408472 289 ntBASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 AP001889.1-201ENST00000525414 633 ntBASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 KRT8P24-201ENST00000560290 1559 ntBASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 AL590440.2-201ENST00000641973 1595 ntBASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CCDC83Q8IWF9 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AP006294.1-201ENST00000415407 339 ntBASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AL590640.2-201ENST00000457038 527 ntBASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AP003171.2-201ENST00000528208 925 ntBASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AC106820.3-201ENST00000561653 397 ntBASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 BX088702.1-201ENST00000610784 235 ntBASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 HPD-204ENST00000543163 1709 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC83Q8IWF9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms