Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF20Q5VTR2 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF20Q5VTR2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF20Q5VTR2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF20Q5VTR2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF20Q5VTR2 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF20Q5VTR2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 BOLA2P3-201ENST00000404566 256 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 AL035414.1-201ENST00000451327 857 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 SORD2P-201ENST00000558556 1069 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 AC073413.1-201ENST00000603927 732 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 AC012645.4-201ENST00000610691 1061 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 ZACNP1-201ENST00000612259 710 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 RHOXF1P1-202ENST00000635473 501 ntBASIC17.58■□□□□ 0.4
RNF20Q5VTR2 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF20Q5VTR2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 AHCYP2-201ENST00000430630 1300 ntBASIC17.57■□□□□ 0.4
RNF20Q5VTR2 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 AP000812.2-201ENST00000538934 718 ntBASIC17.57■□□□□ 0.4
RNF20Q5VTR2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 MIR4683-201ENST00000579659 81 ntBASIC17.57■□□□□ 0.4
RNF20Q5VTR2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RNF20Q5VTR2 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
RNF20Q5VTR2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms