Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CD47Q08722 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CD47Q08722 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CD47Q08722 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD47Q08722 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CD47Q08722 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 AC004890.2-204ENST00000481968 304 ntBASIC13.73□□□□□ -0.21
CD47Q08722 SPDYE18-201ENST00000510091 1050 ntBASIC13.73□□□□□ -0.21
CD47Q08722 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.73□□□□□ -0.21
CD47Q08722 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.73□□□□□ -0.21
CD47Q08722 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.73□□□□□ -0.21
CD47Q08722 AC104794.3-201ENST00000566840 1248 ntBASIC13.73□□□□□ -0.21
CD47Q08722 AC000095.1-201ENST00000603208 874 ntBASIC13.73□□□□□ -0.21
CD47Q08722 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.73□□□□□ -0.21
CD47Q08722 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.73□□□□□ -0.21
CD47Q08722 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.73□□□□□ -0.21
CD47Q08722 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CD47Q08722 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CD47Q08722 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.72□□□□□ -0.21
CD47Q08722 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.72□□□□□ -0.21
CD47Q08722 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CD47Q08722 AC036164.1-201ENST00000570544 333 ntBASIC13.72□□□□□ -0.21
CD47Q08722 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.72□□□□□ -0.21
CD47Q08722 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 SRD5A3P1-201ENST00000603021 949 ntBASIC13.72□□□□□ -0.21
CD47Q08722 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CD47Q08722 AC004840.1-201ENST00000636359 365 ntBASIC13.72□□□□□ -0.21
CD47Q08722 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.72□□□□□ -0.21
CD47Q08722 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CD47Q08722 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms