Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 CYP46A4P-201ENST00000414953 267 ntBASIC16.89■□□□□ 0.29
CHMP4BP1P59074 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 AC100850.1-201ENST00000506768 649 ntBASIC16.89■□□□□ 0.29
CHMP4BP1P59074 RNA5SP423-201ENST00000517127 109 ntBASIC16.89■□□□□ 0.29
CHMP4BP1P59074 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 AP003171.2-201ENST00000528208 925 ntBASIC16.89■□□□□ 0.29
CHMP4BP1P59074 AC079328.1-201ENST00000560358 952 ntBASIC16.89■□□□□ 0.29
CHMP4BP1P59074 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 ZACNP1-201ENST00000612259 710 ntBASIC16.89■□□□□ 0.29
CHMP4BP1P59074 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHMP4BP1P59074 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 GHSR-202ENST00000427970 912 ntBASIC16.88■□□□□ 0.29
CHMP4BP1P59074 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 MIR4683-201ENST00000579659 81 ntBASIC16.88■□□□□ 0.29
CHMP4BP1P59074 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 CLUHP2-201ENST00000426660 1303 ntBASIC16.88■□□□□ 0.29
CHMP4BP1P59074 FKBP4P6-201ENST00000457486 1332 ntBASIC16.88■□□□□ 0.29
CHMP4BP1P59074 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.88■□□□□ 0.29
CHMP4BP1P59074 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SBF1P1-201ENST00000444527 5631 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 AC092506.1-202ENST00000401022 528 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 RNMTL1P1-201ENST00000454103 560 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 UPF3AP2-201ENST00000457924 1132 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 SERPINA13P-202ENST00000478994 924 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 AC106820.3-201ENST00000561653 397 ntBASIC16.87■□□□□ 0.29
CHMP4BP1P59074 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.87■□□□□ 0.29
CHMP4BP1P59074 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms