Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH13P55290 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH13P55290 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH13P55290 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH13P55290 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CDH13P55290 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 HSPA8P5-201ENST00000456928 2069 ntBASIC14.43□□□□□ -0.1
CDH13P55290 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CDH13P55290 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH13P55290 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH13P55290 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.43□□□□□ -0.1
CDH13P55290 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.43□□□□□ -0.1
CDH13P55290 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.43□□□□□ -0.1
CDH13P55290 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CDH13P55290 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CDH13P55290 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
CDH13P55290 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.43□□□□□ -0.1
CDH13P55290 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH13P55290 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH13P55290 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.42□□□□□ -0.1
CDH13P55290 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.42□□□□□ -0.1
CDH13P55290 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.42□□□□□ -0.1
CDH13P55290 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.42□□□□□ -0.1
CDH13P55290 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CDH13P55290 AC236430.1-201ENST00000402231 743 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms