Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC117489.1-201ENST00000625169 3217 ntBASIC15.66■□□□□ 0.1
CDH8P55286 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CDH8P55286 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH8P55286 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 AC015802.1-201ENST00000588104 1449 ntBASIC15.66■□□□□ 0.1
CDH8P55286 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 BX640514.1-201ENST00000583223 1918 ntBASIC15.66■□□□□ 0.1
CDH8P55286 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
CDH8P55286 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.66■□□□□ 0.1
CDH8P55286 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDH8P55286 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 AC012617.1-204ENST00000586340 2305 ntBASIC15.66■□□□□ 0.1
CDH8P55286 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDH8P55286 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CDH8P55286 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 AC004899.1-201ENST00000424687 1714 ntBASIC15.65■□□□□ 0.1
CDH8P55286 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH8P55286 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDH8P55286 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CDH8P55286 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.65■□□□□ 0.1
CDH8P55286 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 AC104073.2-201ENST00000453737 312 ntBASIC15.65■□□□□ 0.1
CDH8P55286 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.65■□□□□ 0.1
CDH8P55286 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 AL160314.3-201ENST00000556041 767 ntBASIC15.65■□□□□ 0.1
CDH8P55286 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH8P55286 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 AC005324.6-201ENST00000587972 613 ntBASIC15.65■□□□□ 0.1
CDH8P55286 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 AC009093.10-201ENST00000641956 1442 ntBASIC15.65■□□□□ 0.1
CDH8P55286 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH8P55286 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.65■□□□□ 0.1
CDH8P55286 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDH8P55286 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDH8P55286 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDH8P55286 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDH8P55286 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH8P55286 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CDH8P55286 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDH8P55286 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 NKAIN1P1-201ENST00000435754 582 ntBASIC15.64■□□□□ 0.09
CDH8P55286 AC012441.2-201ENST00000444843 739 ntBASIC15.64■□□□□ 0.09
CDH8P55286 AC044849.1-201ENST00000519737 1188 ntBASIC15.64■□□□□ 0.09
CDH8P55286 AC126915.1-201ENST00000522847 1038 ntBASIC15.64■□□□□ 0.09
CDH8P55286 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDH8P55286 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.64■□□□□ 0.09
CDH8P55286 AC243960.2-201ENST00000600996 747 ntBASIC15.64■□□□□ 0.09
CDH8P55286 AL451050.2-201ENST00000606967 682 ntBASIC15.64■□□□□ 0.09
CDH8P55286 AL022328.3-201ENST00000607943 679 ntBASIC15.64■□□□□ 0.09
CDH8P55286 AL023803.2-201ENST00000620080 638 ntBASIC15.64■□□□□ 0.09
CDH8P55286 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.64■□□□□ 0.09
CDH8P55286 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
CDH8P55286 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms