Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GRIA1P42261 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC14.9□□□□□ -0.02
GRIA1P42261 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
GRIA1P42261 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
GRIA1P42261 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
GRIA1P42261 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.9□□□□□ -0.02
GRIA1P42261 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.9□□□□□ -0.02
GRIA1P42261 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.9□□□□□ -0.02
GRIA1P42261 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
GRIA1P42261 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.9□□□□□ -0.02
GRIA1P42261 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 TTTY23B-201ENST00000442790 549 ntBASIC14.9□□□□□ -0.02
GRIA1P42261 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.9□□□□□ -0.02
GRIA1P42261 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 SORD2P-201ENST00000558556 1069 ntBASIC14.9□□□□□ -0.02
GRIA1P42261 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.9□□□□□ -0.02
GRIA1P42261 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.9□□□□□ -0.02
GRIA1P42261 AC233724.13-201ENST00000598383 410 ntBASIC14.9□□□□□ -0.02
GRIA1P42261 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.9□□□□□ -0.02
GRIA1P42261 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.9□□□□□ -0.02
GRIA1P42261 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.9□□□□□ -0.02
GRIA1P42261 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 KRT8P24-201ENST00000560290 1559 ntBASIC14.9□□□□□ -0.02
GRIA1P42261 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GRIA1P42261 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
GRIA1P42261 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
GRIA1P42261 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.89□□□□□ -0.03
GRIA1P42261 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GRIA1P42261 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 KRT8P28-201ENST00000433288 1390 ntBASIC14.89□□□□□ -0.03
GRIA1P42261 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.89□□□□□ -0.03
GRIA1P42261 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
GRIA1P42261 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GRIA1P42261 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.89□□□□□ -0.03
GRIA1P42261 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
GRIA1P42261 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GRIA1P42261 AL512384.1-201ENST00000406683 331 ntBASIC14.89□□□□□ -0.03
GRIA1P42261 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.89□□□□□ -0.03
GRIA1P42261 FAM8A4P-201ENST00000435433 1213 ntBASIC14.89□□□□□ -0.03
GRIA1P42261 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.89□□□□□ -0.03
GRIA1P42261 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.89□□□□□ -0.03
GRIA1P42261 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.89□□□□□ -0.03
GRIA1P42261 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.89□□□□□ -0.03
GRIA1P42261 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms