Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCA1A8K7I4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCA1A8K7I4 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCA1A8K7I4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCA1A8K7I4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCA1A8K7I4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.85□□□□□ -0.19
CLCA1A8K7I4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 BOLA2P3-201ENST00000404566 256 ntBASIC13.84□□□□□ -0.19
CLCA1A8K7I4 BAATP1-201ENST00000412284 1225 ntBASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 KRT223P-202ENST00000449164 1292 ntBASIC13.84□□□□□ -0.19
CLCA1A8K7I4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 COX11-210ENST00000639671 696 ntBASIC13.84□□□□□ -0.19
CLCA1A8K7I4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 AC134312.5-201ENST00000568031 1313 ntBASIC13.84□□□□□ -0.19
CLCA1A8K7I4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCA1A8K7I4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CLCA1A8K7I4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLCA1A8K7I4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CLCA1A8K7I4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.83□□□□□ -0.19
CLCA1A8K7I4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.83□□□□□ -0.19
CLCA1A8K7I4 AC105206.1-202ENST00000314927 2368 ntBASIC13.83□□□□□ -0.19
CLCA1A8K7I4 DGCR9-201ENST00000609630 2415 ntBASIC13.83□□□□□ -0.19
CLCA1A8K7I4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 AL138799.1-201ENST00000448213 1675 ntBASIC13.83□□□□□ -0.2
CLCA1A8K7I4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 AC005229.1-201ENST00000392885 409 ntBASIC13.83□□□□□ -0.2
CLCA1A8K7I4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 AC092658.1-201ENST00000505836 891 ntBASIC13.83□□□□□ -0.2
CLCA1A8K7I4 AP001889.1-201ENST00000525414 633 ntBASIC13.83□□□□□ -0.2
CLCA1A8K7I4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLCA1A8K7I4 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms