Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
HCFC2Q9Y5Z7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HCFC2Q9Y5Z7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HCFC2Q9Y5Z7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
HCFC2Q9Y5Z7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
HCFC2Q9Y5Z7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
HCFC2Q9Y5Z7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
HCFC2Q9Y5Z7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.06■■□□□ 1.44
HCFC2Q9Y5Z7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC24.05■■□□□ 1.44
HCFC2Q9Y5Z7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.05■■□□□ 1.44
HCFC2Q9Y5Z7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.05■■□□□ 1.44
HCFC2Q9Y5Z7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.05■■□□□ 1.44
HCFC2Q9Y5Z7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
HCFC2Q9Y5Z7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.04■■□□□ 1.44
HCFC2Q9Y5Z7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC2Q9Y5Z7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
HCFC2Q9Y5Z7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 AC034268.1-201ENST00000441047 882 ntBASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.03■■□□□ 1.44
HCFC2Q9Y5Z7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
HCFC2Q9Y5Z7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 RARRES2P11-201ENST00000635158 484 ntBASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
HCFC2Q9Y5Z7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 AC090192.1-201ENST00000517740 490 ntBASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 AC126544.1-201ENST00000580842 1059 ntBASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 IKBKGP1-201ENST00000612193 1073 ntBASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
HCFC2Q9Y5Z7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 AC022517.1-201ENST00000592429 346 ntBASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
HCFC2Q9Y5Z7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 YBX1P1-201ENST00000445822 960 ntBASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 pRNA.6-201ENST00000610482 90 ntBASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 pRNA.5-201ENST00000612139 90 ntBASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 pRNA.11-201ENST00000618423 90 ntBASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 pRNA.13-201ENST00000619112 90 ntBASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 AL031602.1-201ENST00000633169 911 ntBASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
HCFC2Q9Y5Z7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.97■■□□□ 1.43
HCFC2Q9Y5Z7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms