Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCL19Q99731 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL19Q99731 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CCL19Q99731 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL19Q99731 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL19Q99731 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCL19Q99731 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.35■□□□□ 0.69
CCL19Q99731 MIR3181-201ENST00000578512 73 ntBASIC19.35■□□□□ 0.69
CCL19Q99731 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL19Q99731 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL19Q99731 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.35■□□□□ 0.69
CCL19Q99731 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.35■□□□□ 0.69
CCL19Q99731 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.35■□□□□ 0.69
CCL19Q99731 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL19Q99731 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL19Q99731 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL19Q99731 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL19Q99731 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.34■□□□□ 0.69
CCL19Q99731 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL19Q99731 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL19Q99731 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.34■□□□□ 0.69
CCL19Q99731 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL19Q99731 AC126544.1-201ENST00000580842 1059 ntBASIC19.34■□□□□ 0.69
CCL19Q99731 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL19Q99731 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCL19Q99731 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL19Q99731 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL19Q99731 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCL19Q99731 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL19Q99731 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL19Q99731 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.33■□□□□ 0.68
CCL19Q99731 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL19Q99731 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCL19Q99731 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.33■□□□□ 0.68
CCL19Q99731 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL19Q99731 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL19Q99731 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCL19Q99731 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL19Q99731 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCL19Q99731 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.32■□□□□ 0.68
CCL19Q99731 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL19Q99731 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCL19Q99731 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL19Q99731 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL19Q99731 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL19Q99731 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL19Q99731 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.32■□□□□ 0.68
CCL19Q99731 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL19Q99731 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CCL19Q99731 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL19Q99731 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL19Q99731 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.31■□□□□ 0.68
CCL19Q99731 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL19Q99731 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL19Q99731 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL19Q99731 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CCL19Q99731 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL19Q99731 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.3■□□□□ 0.68
CCL19Q99731 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL19Q99731 AC034268.1-201ENST00000441047 882 ntBASIC19.3■□□□□ 0.68
CCL19Q99731 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
CCL19Q99731 pRNA.6-201ENST00000610482 90 ntBASIC19.3■□□□□ 0.68
CCL19Q99731 pRNA.5-201ENST00000612139 90 ntBASIC19.3■□□□□ 0.68
CCL19Q99731 pRNA.11-201ENST00000618423 90 ntBASIC19.3■□□□□ 0.68
CCL19Q99731 pRNA.13-201ENST00000619112 90 ntBASIC19.3■□□□□ 0.68
CCL19Q99731 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL19Q99731 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCL19Q99731 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL19Q99731 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL19Q99731 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CCL19Q99731 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL19Q99731 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL19Q99731 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL19Q99731 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CCL19Q99731 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL19Q99731 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 AL161729.1-201ENST00000604104 1402 ntBASIC19.28■□□□□ 0.68
CCL19Q99731 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CCL19Q99731 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.28■□□□□ 0.68
CCL19Q99731 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL19Q99731 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
CCL19Q99731 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL19Q99731 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL19Q99731 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCL19Q99731 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL19Q99731 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL19Q99731 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL19Q99731 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.27■□□□□ 0.68
CCL19Q99731 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL19Q99731 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCL19Q99731 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.27■□□□□ 0.68
CCL19Q99731 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.27■□□□□ 0.68
CCL19Q99731 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CCL19Q99731 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms