Protein–RNA interactions for Protein: Q8TF05

PPP4R1, Serine/threonine-protein phosphatase 4 regulatory subunit 1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1Q8TF05 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PPP4R1Q8TF05 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 RPS2P7-201ENST00000447334 885 ntBASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 AC074183.2-201ENST00000623112 922 ntBASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.69■■□□□ 1.22
PPP4R1Q8TF05 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R1Q8TF05 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.68■■□□□ 1.22
PPP4R1Q8TF05 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
PPP4R1Q8TF05 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R1Q8TF05 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R1Q8TF05 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PPP4R1Q8TF05 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 AL117328.2-201ENST00000624617 1940 ntBASIC22.67■■□□□ 1.22
PPP4R1Q8TF05 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 BHLHE23-202ENST00000612929 1109 ntBASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PPP4R1Q8TF05 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 SPCS2P3-201ENST00000500401 656 ntBASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 MIR6765-201ENST00000614092 87 ntBASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PPP4R1Q8TF05 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PPP4R1Q8TF05 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
PPP4R1Q8TF05 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PPP4R1Q8TF05 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PPP4R1Q8TF05 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PPP4R1Q8TF05 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PPP4R1Q8TF05 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PPP4R1Q8TF05 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 AC139795.1-202ENST00000500444 432 ntBASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 AL035685.1-201ENST00000636663 812 ntBASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PPP4R1Q8TF05 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PPP4R1Q8TF05 HYI-210ENST00000486909 905 ntTSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms