Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
TRPM4Q8TD43 AC126544.1-201ENST00000580842 1059 ntBASIC27.44■■□□□ 1.98
TRPM4Q8TD43 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
TRPM4Q8TD43 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
TRPM4Q8TD43 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC27.44■■□□□ 1.98
TRPM4Q8TD43 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 NME4-202ENST00000382940 766 ntTSL 3 BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 NME4-211ENST00000620944 1193 ntTSL 2 BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
TRPM4Q8TD43 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.42■■□□□ 1.98
TRPM4Q8TD43 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC27.42■■□□□ 1.98
TRPM4Q8TD43 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
TRPM4Q8TD43 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
TRPM4Q8TD43 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
TRPM4Q8TD43 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 NKILA-201ENST00000613231 537 ntTSL 4 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
TRPM4Q8TD43 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRPM4Q8TD43 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.39■■□□□ 1.98
TRPM4Q8TD43 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TRPM4Q8TD43 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
TRPM4Q8TD43 MIR6084-201ENST00000622012 110 ntBASIC27.39■■□□□ 1.98
TRPM4Q8TD43 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.39■■□□□ 1.98
TRPM4Q8TD43 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRPM4Q8TD43 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.39■■□□□ 1.97
TRPM4Q8TD43 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 VGF-203ENST00000611537 1622 ntTSL 5 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 AC027612.3-201ENST00000413684 1047 ntBASIC27.38■■□□□ 1.97
TRPM4Q8TD43 pRNA.6-201ENST00000610482 90 ntBASIC27.38■■□□□ 1.97
TRPM4Q8TD43 pRNA.5-201ENST00000612139 90 ntBASIC27.38■■□□□ 1.97
TRPM4Q8TD43 pRNA.11-201ENST00000618423 90 ntBASIC27.38■■□□□ 1.97
TRPM4Q8TD43 pRNA.13-201ENST00000619112 90 ntBASIC27.38■■□□□ 1.97
TRPM4Q8TD43 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRPM4Q8TD43 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRPM4Q8TD43 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.37■■□□□ 1.97
TRPM4Q8TD43 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRPM4Q8TD43 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TRPM4Q8TD43 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRPM4Q8TD43 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
TRPM4Q8TD43 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TRPM4Q8TD43 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC27.35■■□□□ 1.97
TRPM4Q8TD43 AL022069.1-201ENST00000568025 1636 ntBASIC27.35■■□□□ 1.97
TRPM4Q8TD43 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRPM4Q8TD43 AC123595.1-201ENST00000440769 1046 ntBASIC27.35■■□□□ 1.97
TRPM4Q8TD43 PKM-203ENST00000389093 2279 ntTSL 5 BASIC27.35■■□□□ 1.97
TRPM4Q8TD43 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRPM4Q8TD43 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRPM4Q8TD43 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRPM4Q8TD43 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRPM4Q8TD43 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRPM4Q8TD43 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRPM4Q8TD43 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRPM4Q8TD43 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.33■■□□□ 1.97
TRPM4Q8TD43 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC27.33■■□□□ 1.97
TRPM4Q8TD43 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.33■■□□□ 1.97
TRPM4Q8TD43 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC27.33■■□□□ 1.97
TRPM4Q8TD43 AL358852.1-201ENST00000623174 1268 ntBASIC27.33■■□□□ 1.97
TRPM4Q8TD43 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.32■■□□□ 1.96
TRPM4Q8TD43 CCDC92B-201ENST00000575506 885 ntBASIC27.32■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms