Protein–RNA interactions for Protein: Q8NER1

TRPV1, Transient receptor potential cation channel subfamily V member 1, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1Q8NER1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TRPV1Q8NER1 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TRPV1Q8NER1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 KRT18P5-201ENST00000436075 1291 ntBASIC25.74■■□□□ 1.71
TRPV1Q8NER1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.74■■□□□ 1.71
TRPV1Q8NER1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 AC092437.1-201ENST00000624794 1048 ntBASIC25.73■■□□□ 1.71
TRPV1Q8NER1 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TRPV1Q8NER1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TRPV1Q8NER1 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRPV1Q8NER1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TRPV1Q8NER1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TRPV1Q8NER1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TRPV1Q8NER1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.7■■□□□ 1.71
TRPV1Q8NER1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L2-201ENST00000561772 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L6-201ENST00000626483 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L1-201ENST00000627662 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L8-201ENST00000629013 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L3-201ENST00000630187 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L7-201ENST00000630678 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DUX4L5-201ENST00000630834 1275 ntBASIC25.7■■□□□ 1.7
TRPV1Q8NER1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
TRPV1Q8NER1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRPV1Q8NER1 YBX1P1-201ENST00000445822 960 ntBASIC25.69■■□□□ 1.7
TRPV1Q8NER1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.69■■□□□ 1.7
TRPV1Q8NER1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
TRPV1Q8NER1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.69■■□□□ 1.7
TRPV1Q8NER1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.68■■□□□ 1.7
TRPV1Q8NER1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 pRNA.6-201ENST00000610482 90 ntBASIC25.68■■□□□ 1.7
TRPV1Q8NER1 pRNA.5-201ENST00000612139 90 ntBASIC25.68■■□□□ 1.7
TRPV1Q8NER1 pRNA.11-201ENST00000618423 90 ntBASIC25.68■■□□□ 1.7
TRPV1Q8NER1 pRNA.13-201ENST00000619112 90 ntBASIC25.68■■□□□ 1.7
TRPV1Q8NER1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TRPV1Q8NER1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 AC126544.1-201ENST00000580842 1059 ntBASIC25.67■■□□□ 1.7
TRPV1Q8NER1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 AL137784.2-201ENST00000607332 1000 ntBASIC25.67■■□□□ 1.7
TRPV1Q8NER1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
TRPV1Q8NER1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms