Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGP1Q8N7R0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGP1Q8N7R0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 AC093536.1-201ENST00000569153 554 ntBASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 MIR3648-2-201ENST00000581792 180 ntBASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 MIR3648-1-201ENST00000615959 180 ntBASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGP1Q8N7R0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NANOGP1Q8N7R0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NANOGP1Q8N7R0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.33■□□□□ 0.84
NANOGP1Q8N7R0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.33■□□□□ 0.84
NANOGP1Q8N7R0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NANOGP1Q8N7R0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 RPS2P35-201ENST00000443417 897 ntBASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 AC007375.3-201ENST00000600936 2314 ntBASIC20.32■□□□□ 0.84
NANOGP1Q8N7R0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGP1Q8N7R0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGP1Q8N7R0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 ECEL1P2-201ENST00000461596 1295 ntBASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 AC242852.2-201ENST00000615738 1807 ntBASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGP1Q8N7R0 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGP1Q8N7R0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NANOGP1Q8N7R0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.27■□□□□ 0.84
NANOGP1Q8N7R0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NANOGP1Q8N7R0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NANOGP1Q8N7R0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.27■□□□□ 0.84
NANOGP1Q8N7R0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NANOGP1Q8N7R0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.27■□□□□ 0.83
NANOGP1Q8N7R0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.27■□□□□ 0.83
NANOGP1Q8N7R0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.26■□□□□ 0.83
NANOGP1Q8N7R0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NANOGP1Q8N7R0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms