Protein–RNA interactions for Protein: Q8IWS0

PHF6, PHD finger protein 6, humanhuman

Known RBP eCLIP

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF6Q8IWS0 GUK1-235ENST00000493138 694 ntTSL 328.93■■■□□ 2.221e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.11■■■□□ 2.091e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.54■■□□□ 1.841e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.01■■□□□ 1.591e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-213ENST00000453943 656 ntTSL 1 (best)24.83■■□□□ 1.571e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.441e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.85■■□□□ 1.411e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-236ENST00000493209 735 ntTSL 523.3■■□□□ 1.321e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.8■■□□□ 1.081e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-230ENST00000485838 774 ntTSL 321.73■■□□□ 1.071e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.781e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.63■□□□□ 0.251e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-238ENST00000498092 865 ntTSL 516.3■□□□□ 0.21e-6■■■□□ 15.1
PHF6Q8IWS0 GUK1-212ENST00000435153 865 ntTSL 314.67□□□□□ -0.061e-6■■■□□ 15.1
PHF6Q8IWS0 CUX1-210ENST00000497815 947 ntTSL 212.43□□□□□ -0.424e-7■■■□□ 15
PHF6Q8IWS0 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC10.97□□□□□ -0.654e-7■■■□□ 15
PHF6Q8IWS0 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC10.78□□□□□ -0.684e-7■■■□□ 15
PHF6Q8IWS0 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC10.59□□□□□ -0.714e-7■■■□□ 15
PHF6Q8IWS0 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC10.18□□□□□ -0.784e-7■■■□□ 15
PHF6Q8IWS0 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC10.15□□□□□ -0.784e-7■■■□□ 15
PHF6Q8IWS0 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.944e-7■■■□□ 15
PHF6Q8IWS0 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC9.02□□□□□ -0.974e-7■■■□□ 15
PHF6Q8IWS0 CUX1-220ENST00000607092 559 ntTSL 37.65□□□□□ -1.184e-7■■■□□ 15
PHF6Q8IWS0 ISYNA1-204ENST00000577916 2148 ntTSL 523.42■■□□□ 1.343e-8■■■□□ 14.9
PHF6Q8IWS0 ISYNA1-211ENST00000582811 2039 ntTSL 220.67■□□□□ 0.93e-8■■■□□ 14.9
PHF6Q8IWS0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.673e-8■■■□□ 14.9
PHF6Q8IWS0 ISYNA1-210ENST00000582770 1654 ntTSL 217.71■□□□□ 0.433e-8■■■□□ 14.9
PHF6Q8IWS0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.93■□□□□ 0.33e-8■■■□□ 14.9
PHF6Q8IWS0 ISYNA1-203ENST00000577820 1466 ntTSL 515.08■□□□□ 03e-8■■■□□ 14.9
PHF6Q8IWS0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.341e-6■■■□□ 14.9
PHF6Q8IWS0 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.041e-6■■■□□ 14.9
PHF6Q8IWS0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.72■■■□□ 2.354e-6■■■□□ 14.8
PHF6Q8IWS0 CYHR1-207ENST00000528558 907 ntTSL 226.62■■□□□ 1.854e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-221ENST00000582844 957 ntTSL 524.47■■□□□ 1.514e-6■■■□□ 14.8
PHF6Q8IWS0 EHBP1L1-210ENST00000533465 793 ntTSL 322.23■■□□□ 1.154e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-209ENST00000489044 941 ntTSL 320.74■□□□□ 0.914e-6■■■□□ 14.8
PHF6Q8IWS0 CYHR1-206ENST00000526887 1012 ntTSL 319.71■□□□□ 0.754e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-216ENST00000627864 581 ntTSL 319.68■□□□□ 0.744e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-205ENST00000403276 1040 ntTSL 218.97■□□□□ 0.634e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-213ENST00000580446 612 ntTSL 318.68■□□□□ 0.584e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.38■□□□□ 0.534e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.31■□□□□ 0.524e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-218ENST00000629277 2558 nt17.88■□□□□ 0.454e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-223ENST00000584472 586 ntTSL 417.78■□□□□ 0.444e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-219ENST00000581660 611 ntTSL 517.68■□□□□ 0.424e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-211ENST00000579316 692 ntTSL 217.68■□□□□ 0.424e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.4■□□□□ 0.384e-6■■■□□ 14.8
PHF6Q8IWS0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.284e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.254e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-212ENST00000580061 578 ntTSL 316.35■□□□□ 0.214e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-211ENST00000496908 342 ntTSL 1 (best)16■□□□□ 0.154e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-204ENST00000593795 747 ntTSL 515.91■□□□□ 0.144e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.91■□□□□ 0.144e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-204ENST00000476488 264 ntTSL 315.89■□□□□ 0.134e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-212ENST00000598863 551 ntTSL 315.61■□□□□ 0.094e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-207ENST00000485462 2141 ntTSL 1 (best)15.34■□□□□ 0.054e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.14e-6■■■□□ 14.8
PHF6Q8IWS0 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.14e-6■■■□□ 14.8
PHF6Q8IWS0 CYHR1-208ENST00000528663 5821 ntTSL 1 (best)14.35□□□□□ -0.114e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.18□□□□□ -0.144e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-205ENST00000478406 3612 ntTSL 214.05□□□□□ -0.164e-6■■■□□ 14.8
PHF6Q8IWS0 CYHR1-211ENST00000533173 6158 ntTSL 1 (best)13.94□□□□□ -0.184e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-217ENST00000581241 6094 ntTSL 213.92□□□□□ -0.184e-6■■■□□ 14.8
PHF6Q8IWS0 SS18L1-203ENST00000450482 781 ntTSL 513.83□□□□□ -0.24e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-207ENST00000578194 567 ntTSL 413.73□□□□□ -0.214e-6■■■□□ 14.8
PHF6Q8IWS0 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.274e-6■■■□□ 14.8
PHF6Q8IWS0 CSNK1D-226ENST00000585026 563 ntTSL 512.95□□□□□ -0.344e-6■■■□□ 14.8
PHF6Q8IWS0 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.364e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.374e-6■■■□□ 14.8
PHF6Q8IWS0 EHBP1L1-202ENST00000526990 3169 nt12.66□□□□□ -0.384e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-202ENST00000369957 784 ntTSL 311.17□□□□□ -0.624e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-201ENST00000303391 10505 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.764e-6■■■□□ 14.8
PHF6Q8IWS0 GET4-204ENST00000426056 502 ntTSL 410.21□□□□□ -0.774e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-201ENST00000330854 3629 ntTSL 1 (best)10.16□□□□□ -0.784e-6■■■□□ 14.8
PHF6Q8IWS0 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.824e-6■■■□□ 14.8
PHF6Q8IWS0 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.834e-6■■■□□ 14.8
PHF6Q8IWS0 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.954e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-206ENST00000594773 4169 ntTSL 29.09□□□□□ -0.954e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-220ENST00000631210 490 ntTSL 1 (best)8.57□□□□□ -1.044e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-204ENST00000415944 413 ntTSL 58.55□□□□□ -1.044e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-207ENST00000597095 536 ntTSL 28.2□□□□□ -1.14e-6■■■□□ 14.8
PHF6Q8IWS0 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.464e-6■■■□□ 14.8
PHF6Q8IWS0 SUGP2-208ENST00000597163 423 ntTSL 34.36□□□□□ -1.714e-6■■■□□ 14.8
PHF6Q8IWS0 MECP2-222ENST00000637533 140 ntTSL 51.87□□□□□ -2.114e-6■■■□□ 14.8
PHF6Q8IWS0 FLVCR2-205ENST00000554496 441 ntTSL 312.43□□□□□ -0.425e-33■■■□□ 14.8
PHF6Q8IWS0 FLVCR2-209ENST00000555385 218 ntTSL 411.66□□□□□ -0.545e-33■■■□□ 14.8
PHF6Q8IWS0 FLVCR2-201ENST00000238667 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.575e-33■■■□□ 14.8
PHF6Q8IWS0 RNA5SP387-201ENST00000364226 106 ntBASIC5.68□□□□□ -1.55e-33■■■□□ 14.8
PHF6Q8IWS0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.236e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.28■■□□□ 1.326e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.116e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.49■■□□□ 1.036e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.97■□□□□ 0.956e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-221ENST00000552383 1267 ntTSL 219.32■□□□□ 0.686e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.04■□□□□ 0.326e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.37■□□□□ 0.216e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-209ENST00000546979 554 ntTSL 316.06■□□□□ 0.166e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.7■□□□□ 0.16e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC10.53□□□□□ -0.726e-7■■■□□ 14.7
PHF6Q8IWS0 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.62□□□□□ -0.876e-7■■■□□ 14.7
Retrieved 100 of 4,170 protein–RNA pairs in 83.6 ms