Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 SNX3-202ENST00000349379 890 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF180Q86T96 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC25.51■■□□□ 1.67
RNF180Q86T96 AC022517.1-201ENST00000592429 346 ntBASIC25.51■■□□□ 1.67
RNF180Q86T96 MIR6089-201ENST00000616698 64 ntBASIC25.51■■□□□ 1.67
RNF180Q86T96 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF180Q86T96 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
RNF180Q86T96 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
RNF180Q86T96 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF180Q86T96 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.5■■□□□ 1.67
RNF180Q86T96 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF180Q86T96 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RNF180Q86T96 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
RNF180Q86T96 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC25.5■■□□□ 1.67
RNF180Q86T96 YBX1P1-201ENST00000445822 960 ntBASIC25.5■■□□□ 1.67
RNF180Q86T96 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.5■■□□□ 1.67
RNF180Q86T96 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.5■■□□□ 1.67
RNF180Q86T96 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.5■■□□□ 1.67
RNF180Q86T96 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.5■■□□□ 1.67
RNF180Q86T96 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RNF180Q86T96 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF180Q86T96 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
RNF180Q86T96 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
RNF180Q86T96 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF180Q86T96 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF180Q86T96 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.49■■□□□ 1.67
RNF180Q86T96 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.48■■□□□ 1.67
RNF180Q86T96 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF180Q86T96 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
RNF180Q86T96 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF180Q86T96 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF180Q86T96 AL137784.2-201ENST00000607332 1000 ntBASIC25.48■■□□□ 1.67
RNF180Q86T96 IKBKGP1-201ENST00000612193 1073 ntBASIC25.48■■□□□ 1.67
RNF180Q86T96 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.48■■□□□ 1.67
RNF180Q86T96 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.48■■□□□ 1.67
RNF180Q86T96 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.48■■□□□ 1.67
RNF180Q86T96 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RNF180Q86T96 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF180Q86T96 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF180Q86T96 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF180Q86T96 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.47■■□□□ 1.67
RNF180Q86T96 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF180Q86T96 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF180Q86T96 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF180Q86T96 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF180Q86T96 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
RNF180Q86T96 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF180Q86T96 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF180Q86T96 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
RNF180Q86T96 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF180Q86T96 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF180Q86T96 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.46■■□□□ 1.67
RNF180Q86T96 KRT18P5-201ENST00000436075 1291 ntBASIC25.46■■□□□ 1.67
RNF180Q86T96 pRNA.6-201ENST00000610482 90 ntBASIC25.46■■□□□ 1.67
RNF180Q86T96 pRNA.5-201ENST00000612139 90 ntBASIC25.46■■□□□ 1.67
RNF180Q86T96 pRNA.11-201ENST00000618423 90 ntBASIC25.46■■□□□ 1.67
RNF180Q86T96 pRNA.13-201ENST00000619112 90 ntBASIC25.46■■□□□ 1.67
RNF180Q86T96 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
RNF180Q86T96 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.67
RNF180Q86T96 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
RNF180Q86T96 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF180Q86T96 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF180Q86T96 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.45■■□□□ 1.66
RNF180Q86T96 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
RNF180Q86T96 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.45■■□□□ 1.66
RNF180Q86T96 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF180Q86T96 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
RNF180Q86T96 TSPY26P-201ENST00000476365 1326 ntBASIC25.44■■□□□ 1.66
RNF180Q86T96 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF180Q86T96 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF180Q86T96 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF180Q86T96 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
RNF180Q86T96 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF180Q86T96 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
RNF180Q86T96 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
RNF180Q86T96 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.44■■□□□ 1.66
RNF180Q86T96 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
RNF180Q86T96 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
RNF180Q86T96 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
RNF180Q86T96 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF180Q86T96 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.43■■□□□ 1.66
RNF180Q86T96 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF180Q86T96 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RNF180Q86T96 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF180Q86T96 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF180Q86T96 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF180Q86T96 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.42■■□□□ 1.66
RNF180Q86T96 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF180Q86T96 SLC47A1P1-202ENST00000449666 945 ntBASIC25.42■■□□□ 1.66
RNF180Q86T96 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF180Q86T96 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC25.42■■□□□ 1.66
RNF180Q86T96 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF180Q86T96 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.42■■□□□ 1.66
RNF180Q86T96 AL031602.1-201ENST00000633169 911 ntBASIC25.42■■□□□ 1.66
RNF180Q86T96 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RNF180Q86T96 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
RNF180Q86T96 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RNF180Q86T96 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RNF180Q86T96 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.41■■□□□ 1.66
RNF180Q86T96 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
RNF180Q86T96 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms