Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 AL031848.2-201ENST00000607670 837 ntBASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRFN4Q6PJG9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 AC131274.2-201ENST00000580697 1507 ntBASIC20.37■□□□□ 0.85
LRFN4Q6PJG9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 AL022069.1-201ENST00000568025 1636 ntBASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 RARRES2P1-201ENST00000474487 481 ntBASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 AL161729.1-201ENST00000604104 1402 ntBASIC20.36■□□□□ 0.85
LRFN4Q6PJG9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 AC079834.2-201ENST00000609776 1949 ntBASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LRFN4Q6PJG9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LRFN4Q6PJG9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN4Q6PJG9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.33■□□□□ 0.85
LRFN4Q6PJG9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN4Q6PJG9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN4Q6PJG9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN4Q6PJG9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LRFN4Q6PJG9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LRFN4Q6PJG9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN4Q6PJG9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN4Q6PJG9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.32■□□□□ 0.84
LRFN4Q6PJG9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.32■□□□□ 0.84
LRFN4Q6PJG9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN4Q6PJG9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LRFN4Q6PJG9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 AC137630.3-201ENST00000607245 391 ntBASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRFN4Q6PJG9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRFN4Q6PJG9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRFN4Q6PJG9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms