Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.71■□□□□ 0.43
GFI1BQ5VTD9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
GFI1BQ5VTD9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
GFI1BQ5VTD9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 AC025884.2-201ENST00000553429 711 ntBASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 AC092296.2-201ENST00000589470 999 ntBASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
GFI1BQ5VTD9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 MIR3960-201ENST00000583311 91 ntBASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
GFI1BQ5VTD9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 AC022413.1-201ENST00000624602 984 ntBASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 SMPD5-203ENST00000639008 1464 ntBASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GFI1BQ5VTD9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 PKD1P6-201ENST00000343738 4769 ntBASIC17.67■□□□□ 0.42
GFI1BQ5VTD9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GFI1BQ5VTD9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GFI1BQ5VTD9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
GFI1BQ5VTD9 GUSBP5-202ENST00000510805 1989 ntBASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 ECEL1P2-201ENST00000461596 1295 ntBASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
GFI1BQ5VTD9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms