Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01554Q52M75 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01554Q52M75 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
LINC01554Q52M75 LETM1P2-201ENST00000597330 2178 ntBASIC11.4□□□□□ -0.59
LINC01554Q52M75 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
LINC01554Q52M75 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
LINC01554Q52M75 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 DENR-202ENST00000455982 1052 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 RPS2-209ENST00000529806 993 ntTSL 3 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
LINC01554Q52M75 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LINC01554Q52M75 AC120498.9-201ENST00000339021 3867 ntBASIC11.37□□□□□ -0.59
LINC01554Q52M75 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 AL117328.2-201ENST00000624617 1940 ntBASIC11.37□□□□□ -0.59
LINC01554Q52M75 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LINC01554Q52M75 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC11.37□□□□□ -0.59
LINC01554Q52M75 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LINC01554Q52M75 AL391121.1-201ENST00000607967 1349 ntBASIC11.36□□□□□ -0.59
LINC01554Q52M75 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
LINC01554Q52M75 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
LINC01554Q52M75 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 AC097358.2-201ENST00000607541 1159 ntBASIC11.36□□□□□ -0.59
LINC01554Q52M75 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC01554Q52M75 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LINC01554Q52M75 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LINC01554Q52M75 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC11.35□□□□□ -0.59
LINC01554Q52M75 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LINC01554Q52M75 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms