Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.46■□□□□ 0.71
UBA52P62987 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.46■□□□□ 0.71
UBA52P62987 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.46■□□□□ 0.71
UBA52P62987 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.46■□□□□ 0.71
UBA52P62987 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA52P62987 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBA52P62987 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBA52P62987 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBA52P62987 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA52P62987 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.45■□□□□ 0.7
UBA52P62987 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBA52P62987 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.45■□□□□ 0.7
UBA52P62987 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.45■□□□□ 0.7
UBA52P62987 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA52P62987 Z92544.1-202ENST00000571933 1220 ntBASIC19.45■□□□□ 0.7
UBA52P62987 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA52P62987 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBA52P62987 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBA52P62987 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBA52P62987 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.44■□□□□ 0.7
UBA52P62987 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.44■□□□□ 0.7
UBA52P62987 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBA52P62987 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.43■□□□□ 0.7
UBA52P62987 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBA52P62987 LONRF2P2-201ENST00000439212 571 ntBASIC19.43■□□□□ 0.7
UBA52P62987 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
UBA52P62987 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.43■□□□□ 0.7
UBA52P62987 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
UBA52P62987 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.43■□□□□ 0.7
UBA52P62987 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
UBA52P62987 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBA52P62987 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBA52P62987 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
UBA52P62987 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.42■□□□□ 0.7
UBA52P62987 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.42■□□□□ 0.7
UBA52P62987 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBA52P62987 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBA52P62987 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBA52P62987 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBA52P62987 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBA52P62987 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBA52P62987 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.4■□□□□ 0.7
UBA52P62987 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBA52P62987 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.4■□□□□ 0.7
UBA52P62987 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.4■□□□□ 0.7
UBA52P62987 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBA52P62987 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.4■□□□□ 0.7
UBA52P62987 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBA52P62987 EP400NL-214ENST00000641289 2402 ntBASIC19.4■□□□□ 0.7
UBA52P62987 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBA52P62987 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UBA52P62987 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBA52P62987 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBA52P62987 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBA52P62987 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
UBA52P62987 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UBA52P62987 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBA52P62987 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.39■□□□□ 0.69
UBA52P62987 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBA52P62987 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBA52P62987 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBA52P62987 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UBA52P62987 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.38■□□□□ 0.69
UBA52P62987 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBA52P62987 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBA52P62987 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBA52P62987 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBA52P62987 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBA52P62987 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms