Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM50BP56557 AL592293.1-201ENST00000502889 1188 ntBASIC19.33■□□□□ 0.68
TMEM50BP56557 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TMEM50BP56557 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM50BP56557 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM50BP56557 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM50BP56557 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM50BP56557 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TMEM50BP56557 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM50BP56557 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM50BP56557 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.32■□□□□ 0.68
TMEM50BP56557 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
TMEM50BP56557 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM50BP56557 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM50BP56557 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TMEM50BP56557 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM50BP56557 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM50BP56557 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM50BP56557 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM50BP56557 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TMEM50BP56557 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM50BP56557 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM50BP56557 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM50BP56557 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM50BP56557 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM50BP56557 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM50BP56557 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM50BP56557 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM50BP56557 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM50BP56557 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM50BP56557 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TMEM50BP56557 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM50BP56557 RNF126P1-201ENST00000567452 1320 ntBASIC19.29■□□□□ 0.68
TMEM50BP56557 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM50BP56557 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM50BP56557 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM50BP56557 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM50BP56557 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM50BP56557 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM50BP56557 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.28■□□□□ 0.68
TMEM50BP56557 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
TMEM50BP56557 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.28■□□□□ 0.68
TMEM50BP56557 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 AL022069.1-201ENST00000568025 1636 ntBASIC19.28■□□□□ 0.68
TMEM50BP56557 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM50BP56557 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TMEM50BP56557 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM50BP56557 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM50BP56557 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TMEM50BP56557 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
TMEM50BP56557 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM50BP56557 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.27■□□□□ 0.68
TMEM50BP56557 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM50BP56557 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TMEM50BP56557 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM50BP56557 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.27■□□□□ 0.67
TMEM50BP56557 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM50BP56557 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TMEM50BP56557 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.27■□□□□ 0.67
TMEM50BP56557 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TMEM50BP56557 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TMEM50BP56557 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM50BP56557 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM50BP56557 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM50BP56557 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
TMEM50BP56557 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TMEM50BP56557 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM50BP56557 LINC00565-201ENST00000562710 2331 ntBASIC19.25■□□□□ 0.67
TMEM50BP56557 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TMEM50BP56557 DUX4L9-201ENST00000449051 1259 ntBASIC19.25■□□□□ 0.67
TMEM50BP56557 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.25■□□□□ 0.67
TMEM50BP56557 MIR6765-201ENST00000614092 87 ntBASIC19.25■□□□□ 0.67
TMEM50BP56557 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TMEM50BP56557 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.25■□□□□ 0.67
TMEM50BP56557 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms