Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GABRA4P48169 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GABRA4P48169 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GABRA4P48169 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.73■■□□□ 1.07
GABRA4P48169 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.73■■□□□ 1.07
GABRA4P48169 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GABRA4P48169 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GABRA4P48169 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GABRA4P48169 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.73■■□□□ 1.07
GABRA4P48169 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
GABRA4P48169 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.73■■□□□ 1.07
GABRA4P48169 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GABRA4P48169 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.73■■□□□ 1.07
GABRA4P48169 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.72■■□□□ 1.07
GABRA4P48169 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 AC110285.6-201ENST00000617652 491 ntBASIC21.72■■□□□ 1.07
GABRA4P48169 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 AC009102.2-201ENST00000606772 1639 ntBASIC21.72■■□□□ 1.07
GABRA4P48169 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
GABRA4P48169 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GABRA4P48169 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GABRA4P48169 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GABRA4P48169 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABRA4P48169 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABRA4P48169 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.71■■□□□ 1.07
GABRA4P48169 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
GABRA4P48169 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABRA4P48169 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GABRA4P48169 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.71■■□□□ 1.07
GABRA4P48169 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GABRA4P48169 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GABRA4P48169 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.7■■□□□ 1.06
GABRA4P48169 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.7■■□□□ 1.06
GABRA4P48169 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.7■■□□□ 1.06
GABRA4P48169 AL139246.5-201ENST00000606645 996 ntBASIC21.7■■□□□ 1.06
GABRA4P48169 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GABRA4P48169 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GABRA4P48169 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.69■■□□□ 1.06
GABRA4P48169 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.69■■□□□ 1.06
GABRA4P48169 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.69■■□□□ 1.06
GABRA4P48169 AL139125.2-201ENST00000623134 1869 ntBASIC21.69■■□□□ 1.06
GABRA4P48169 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABRA4P48169 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABRA4P48169 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.69■■□□□ 1.06
GABRA4P48169 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GABRA4P48169 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.69■■□□□ 1.06
GABRA4P48169 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
GABRA4P48169 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GABRA4P48169 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
GABRA4P48169 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
GABRA4P48169 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABRA4P48169 AC096631.2-201ENST00000436136 790 ntBASIC21.68■■□□□ 1.06
GABRA4P48169 SRD5A1P1-201ENST00000442297 786 ntBASIC21.68■■□□□ 1.06
GABRA4P48169 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GABRA4P48169 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
GABRA4P48169 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
GABRA4P48169 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.68■■□□□ 1.06
GABRA4P48169 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABRA4P48169 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABRA4P48169 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GABRA4P48169 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GABRA4P48169 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.67■■□□□ 1.06
GABRA4P48169 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GABRA4P48169 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GABRA4P48169 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GABRA4P48169 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.67■■□□□ 1.06
GABRA4P48169 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.67■■□□□ 1.06
GABRA4P48169 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.67■■□□□ 1.06
GABRA4P48169 LINC00543-201ENST00000567234 1845 ntBASIC21.66■■□□□ 1.06
GABRA4P48169 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.66■■□□□ 1.06
GABRA4P48169 AC141586.4-201ENST00000624558 1573 ntBASIC21.66■■□□□ 1.06
GABRA4P48169 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GABRA4P48169 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.66■■□□□ 1.06
GABRA4P48169 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.66■■□□□ 1.06
GABRA4P48169 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GABRA4P48169 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
GABRA4P48169 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GABRA4P48169 MIR638-201ENST00000385237 100 ntBASIC21.65■■□□□ 1.06
GABRA4P48169 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.65■■□□□ 1.06
GABRA4P48169 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GABRA4P48169 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GABRA4P48169 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GABRA4P48169 C17orf82-201ENST00000623772 1530 ntBASIC21.65■■□□□ 1.06
GABRA4P48169 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GABRA4P48169 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GABRA4P48169 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GABRA4P48169 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.64■■□□□ 1.05
GABRA4P48169 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GABRA4P48169 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
GABRA4P48169 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.64■■□□□ 1.05
GABRA4P48169 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.64■■□□□ 1.05
GABRA4P48169 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GABRA4P48169 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GABRA4P48169 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GABRA4P48169 LINC01124-201ENST00000409786 2117 ntBASIC21.64■■□□□ 1.05
GABRA4P48169 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms