Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP11P24347 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
MMP11P24347 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP11P24347 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.62■■□□□ 1.05
MMP11P24347 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.62■■□□□ 1.05
MMP11P24347 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MMP11P24347 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.62■■□□□ 1.05
MMP11P24347 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP11P24347 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
MMP11P24347 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP11P24347 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.61■■□□□ 1.05
MMP11P24347 AL139246.5-201ENST00000606645 996 ntBASIC21.61■■□□□ 1.05
MMP11P24347 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP11P24347 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP11P24347 LINC00543-201ENST00000567234 1845 ntBASIC21.61■■□□□ 1.05
MMP11P24347 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MMP11P24347 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP11P24347 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.61■■□□□ 1.05
MMP11P24347 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
MMP11P24347 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
MMP11P24347 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MMP11P24347 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
MMP11P24347 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP11P24347 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.59■■□□□ 1.05
MMP11P24347 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MMP11P24347 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.59■■□□□ 1.05
MMP11P24347 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.59■■□□□ 1.05
MMP11P24347 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP11P24347 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.59■■□□□ 1.05
MMP11P24347 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MMP11P24347 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MMP11P24347 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP11P24347 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MMP11P24347 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
MMP11P24347 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
MMP11P24347 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.57■■□□□ 1.04
MMP11P24347 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
MMP11P24347 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MMP11P24347 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.57■■□□□ 1.04
MMP11P24347 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
MMP11P24347 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
MMP11P24347 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 MIR638-201ENST00000385237 100 ntBASIC21.56■■□□□ 1.04
MMP11P24347 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MMP11P24347 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.56■■□□□ 1.04
MMP11P24347 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
MMP11P24347 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.56■■□□□ 1.04
MMP11P24347 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MMP11P24347 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP11P24347 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP11P24347 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MMP11P24347 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.55■■□□□ 1.04
MMP11P24347 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
MMP11P24347 AC131274.2-201ENST00000580697 1507 ntBASIC21.55■■□□□ 1.04
MMP11P24347 AC005703.6-201ENST00000623265 1329 ntBASIC21.55■■□□□ 1.04
MMP11P24347 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
MMP11P24347 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP11P24347 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP11P24347 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP11P24347 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.54■■□□□ 1.04
MMP11P24347 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP11P24347 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP11P24347 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.54■■□□□ 1.04
MMP11P24347 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MMP11P24347 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MMP11P24347 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP11P24347 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MMP11P24347 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
MMP11P24347 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.53■■□□□ 1.04
MMP11P24347 AC096631.2-201ENST00000436136 790 ntBASIC21.53■■□□□ 1.04
MMP11P24347 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.53■■□□□ 1.04
MMP11P24347 AC110285.6-201ENST00000617652 491 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms