Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF728P0DKX0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF728P0DKX0 MIR4508-201ENST00000584178 70 ntBASIC19.3■□□□□ 0.68
ZNF728P0DKX0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF728P0DKX0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF728P0DKX0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF728P0DKX0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ZNF728P0DKX0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ZNF728P0DKX0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 KRT8P33-201ENST00000508125 1423 ntBASIC19.28■□□□□ 0.68
ZNF728P0DKX0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ZNF728P0DKX0 AC090877.2-201ENST00000558441 1738 ntBASIC19.28■□□□□ 0.68
ZNF728P0DKX0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 AC011551.1-201ENST00000614101 683 ntBASIC19.27■□□□□ 0.68
ZNF728P0DKX0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ZNF728P0DKX0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF728P0DKX0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.67
ZNF728P0DKX0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF728P0DKX0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF728P0DKX0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
ZNF728P0DKX0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ZNF728P0DKX0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 AC103834.1-201ENST00000520383 144 ntBASIC19.26■□□□□ 0.67
ZNF728P0DKX0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF728P0DKX0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF728P0DKX0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 KRT18P24-201ENST00000344739 1156 ntBASIC19.24■□□□□ 0.67
ZNF728P0DKX0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF728P0DKX0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 AC120024.1-201ENST00000562672 995 ntBASIC19.23■□□□□ 0.67
ZNF728P0DKX0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF728P0DKX0 THA1P-201ENST00000590384 1145 ntBASIC19.23■□□□□ 0.67
ZNF728P0DKX0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms