Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GYPBP06028 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.42■□□□□ 0.86
GYPBP06028 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GYPBP06028 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
GYPBP06028 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GYPBP06028 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
GYPBP06028 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.41■□□□□ 0.86
GYPBP06028 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GYPBP06028 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
GYPBP06028 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.41■□□□□ 0.86
GYPBP06028 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.41■□□□□ 0.86
GYPBP06028 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.41■□□□□ 0.86
GYPBP06028 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.41■□□□□ 0.86
GYPBP06028 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.41■□□□□ 0.86
GYPBP06028 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GYPBP06028 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GYPBP06028 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.4■□□□□ 0.86
GYPBP06028 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GYPBP06028 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
GYPBP06028 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.39■□□□□ 0.85
GYPBP06028 AL161729.1-201ENST00000604104 1402 ntBASIC20.39■□□□□ 0.85
GYPBP06028 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GYPBP06028 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GYPBP06028 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GYPBP06028 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
GYPBP06028 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.38■□□□□ 0.85
GYPBP06028 AL022069.1-201ENST00000568025 1636 ntBASIC20.38■□□□□ 0.85
GYPBP06028 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GYPBP06028 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GYPBP06028 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GYPBP06028 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GYPBP06028 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GYPBP06028 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GYPBP06028 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.37■□□□□ 0.85
GYPBP06028 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
GYPBP06028 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GYPBP06028 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GYPBP06028 DUX4L18-201ENST00000553347 1267 ntBASIC20.37■□□□□ 0.85
GYPBP06028 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
GYPBP06028 AC079834.2-201ENST00000609776 1949 ntBASIC20.37■□□□□ 0.85
GYPBP06028 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.37■□□□□ 0.85
GYPBP06028 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GYPBP06028 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 AC092068.2-201ENST00000590491 1708 ntBASIC20.36■□□□□ 0.85
GYPBP06028 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
GYPBP06028 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.36■□□□□ 0.85
GYPBP06028 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GYPBP06028 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
GYPBP06028 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GYPBP06028 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GYPBP06028 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GYPBP06028 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
GYPBP06028 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GYPBP06028 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GYPBP06028 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.35■□□□□ 0.85
GYPBP06028 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.35■□□□□ 0.85
GYPBP06028 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
GYPBP06028 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GYPBP06028 AC131274.2-201ENST00000580697 1507 ntBASIC20.35■□□□□ 0.85
GYPBP06028 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
GYPBP06028 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GYPBP06028 DUSP8P3-201ENST00000399571 1760 ntBASIC20.34■□□□□ 0.85
GYPBP06028 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.34■□□□□ 0.85
GYPBP06028 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GYPBP06028 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
GYPBP06028 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.34■□□□□ 0.85
GYPBP06028 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GYPBP06028 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GYPBP06028 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GYPBP06028 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
GYPBP06028 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
GYPBP06028 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
GYPBP06028 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
GYPBP06028 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
GYPBP06028 C1orf229-201ENST00000623686 2258 ntBASIC20.33■□□□□ 0.85
GYPBP06028 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
GYPBP06028 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GYPBP06028 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
GYPBP06028 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
GYPBP06028 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.33■□□□□ 0.85
GYPBP06028 AC011551.1-201ENST00000614101 683 ntBASIC20.33■□□□□ 0.85
GYPBP06028 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
GYPBP06028 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GYPBP06028 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GYPBP06028 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GYPBP06028 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms