Protein–RNA interactions for Protein: P04435

TCRB, T-cell receptor beta chain V region CTL-L17, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBP04435 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TCRBP04435 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBP04435 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBP04435 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBP04435 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBP04435 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBP04435 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBP04435 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBP04435 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBP04435 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.37■□□□□ 0.69
TCRBP04435 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TCRBP04435 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBP04435 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBP04435 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
TCRBP04435 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBP04435 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBP04435 AC148477.6-201ENST00000623746 465 ntBASIC19.37■□□□□ 0.69
TCRBP04435 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBP04435 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBP04435 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBP04435 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBP04435 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBP04435 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBP04435 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBP04435 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.36■□□□□ 0.69
TCRBP04435 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBP04435 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBP04435 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBP04435 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBP04435 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBP04435 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBP04435 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBP04435 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBP04435 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBP04435 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBP04435 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TCRBP04435 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TCRBP04435 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
TCRBP04435 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBP04435 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TCRBP04435 ESRRAP2-201ENST00000418437 1549 ntBASIC19.34■□□□□ 0.69
TCRBP04435 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBP04435 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBP04435 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBP04435 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBP04435 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TCRBP04435 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.33■□□□□ 0.69
TCRBP04435 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBP04435 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBP04435 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.33■□□□□ 0.69
TCRBP04435 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TCRBP04435 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBP04435 AC008813.1-201ENST00000536597 885 ntBASIC19.33■□□□□ 0.68
TCRBP04435 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBP04435 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBP04435 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBP04435 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBP04435 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBP04435 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBP04435 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBP04435 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBP04435 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRBP04435 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.32■□□□□ 0.68
TCRBP04435 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBP04435 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.32■□□□□ 0.68
TCRBP04435 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRBP04435 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBP04435 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBP04435 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBP04435 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TCRBP04435 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRBP04435 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBP04435 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TCRBP04435 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.31■□□□□ 0.68
TCRBP04435 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBP04435 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBP04435 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRBP04435 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.3■□□□□ 0.68
TCRBP04435 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TCRBP04435 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRBP04435 MIR3665-201ENST00000578708 105 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms