Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.24■□□□□ 0.99
OPN1SWP03999 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.24■□□□□ 0.99
OPN1SWP03999 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPN1SWP03999 HSD17B1P1-201ENST00000590052 955 ntBASIC21.24■□□□□ 0.99
OPN1SWP03999 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
OPN1SWP03999 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPN1SWP03999 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
OPN1SWP03999 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
OPN1SWP03999 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.24■□□□□ 0.99
OPN1SWP03999 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.24■□□□□ 0.99
OPN1SWP03999 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
OPN1SWP03999 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.23■□□□□ 0.99
OPN1SWP03999 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
OPN1SWP03999 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
OPN1SWP03999 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.23■□□□□ 0.99
OPN1SWP03999 KRT18P60-201ENST00000312876 1297 ntBASIC21.23■□□□□ 0.99
OPN1SWP03999 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.23■□□□□ 0.99
OPN1SWP03999 AC079834.2-201ENST00000609776 1949 ntBASIC21.23■□□□□ 0.99
OPN1SWP03999 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
OPN1SWP03999 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OPN1SWP03999 AL161729.1-201ENST00000604104 1402 ntBASIC21.22■□□□□ 0.99
OPN1SWP03999 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
OPN1SWP03999 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
OPN1SWP03999 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
OPN1SWP03999 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
OPN1SWP03999 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.22■□□□□ 0.99
OPN1SWP03999 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OPN1SWP03999 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
OPN1SWP03999 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
OPN1SWP03999 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.21■□□□□ 0.99
OPN1SWP03999 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.21■□□□□ 0.99
OPN1SWP03999 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
OPN1SWP03999 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.21■□□□□ 0.99
OPN1SWP03999 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
OPN1SWP03999 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
OPN1SWP03999 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
OPN1SWP03999 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
OPN1SWP03999 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
OPN1SWP03999 AL022069.1-201ENST00000568025 1636 ntBASIC21.2■□□□□ 0.98
OPN1SWP03999 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
OPN1SWP03999 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.2■□□□□ 0.98
OPN1SWP03999 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
OPN1SWP03999 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
OPN1SWP03999 AC092068.2-201ENST00000590491 1708 ntBASIC21.2■□□□□ 0.98
OPN1SWP03999 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
OPN1SWP03999 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.2■□□□□ 0.98
OPN1SWP03999 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
OPN1SWP03999 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
OPN1SWP03999 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
OPN1SWP03999 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.19■□□□□ 0.98
OPN1SWP03999 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
OPN1SWP03999 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 DUSP8P3-201ENST00000399571 1760 ntBASIC21.18■□□□□ 0.98
OPN1SWP03999 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.18■□□□□ 0.98
OPN1SWP03999 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
OPN1SWP03999 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 AC131274.2-201ENST00000580697 1507 ntBASIC21.18■□□□□ 0.98
OPN1SWP03999 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
OPN1SWP03999 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
OPN1SWP03999 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
OPN1SWP03999 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
OPN1SWP03999 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
OPN1SWP03999 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
OPN1SWP03999 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
OPN1SWP03999 C1orf229-201ENST00000623686 2258 ntBASIC21.16■□□□□ 0.98
OPN1SWP03999 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
OPN1SWP03999 AC233723.2-201ENST00000623798 2106 ntBASIC21.16■□□□□ 0.98
OPN1SWP03999 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
OPN1SWP03999 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
OPN1SWP03999 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
OPN1SWP03999 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.16■□□□□ 0.98
OPN1SWP03999 DUX4L18-201ENST00000553347 1267 ntBASIC21.16■□□□□ 0.98
OPN1SWP03999 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
OPN1SWP03999 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.16■□□□□ 0.98
OPN1SWP03999 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
OPN1SWP03999 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.15■□□□□ 0.98
OPN1SWP03999 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
OPN1SWP03999 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.15■□□□□ 0.98
OPN1SWP03999 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
OPN1SWP03999 AC011551.1-201ENST00000614101 683 ntBASIC21.15■□□□□ 0.98
OPN1SWP03999 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms