Protein–RNA interactions for Protein: O95260

ATE1, Arginyl-tRNA--protein transferase 1, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATE1O95260 MIR3960-201ENST00000583311 91 ntBASIC21.19■□□□□ 0.98
ATE1O95260 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.19■□□□□ 0.98
ATE1O95260 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATE1O95260 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATE1O95260 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATE1O95260 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.18■□□□□ 0.98
ATE1O95260 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATE1O95260 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATE1O95260 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.18■□□□□ 0.98
ATE1O95260 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.18■□□□□ 0.98
ATE1O95260 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATE1O95260 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.18■□□□□ 0.98
ATE1O95260 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.18■□□□□ 0.98
ATE1O95260 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.17■□□□□ 0.98
ATE1O95260 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.17■□□□□ 0.98
ATE1O95260 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATE1O95260 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.17■□□□□ 0.98
ATE1O95260 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 PVT1_1.1-201ENST00000615125 194 ntBASIC21.17■□□□□ 0.98
ATE1O95260 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.17■□□□□ 0.98
ATE1O95260 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATE1O95260 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATE1O95260 LINC00526-201ENST00000581067 1875 ntBASIC21.16■□□□□ 0.98
ATE1O95260 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATE1O95260 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.16■□□□□ 0.98
ATE1O95260 AL359504.2-201ENST00000605506 1601 ntBASIC21.16■□□□□ 0.98
ATE1O95260 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATE1O95260 GUSBP5-201ENST00000418136 578 ntBASIC21.16■□□□□ 0.98
ATE1O95260 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.16■□□□□ 0.98
ATE1O95260 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.16■□□□□ 0.98
ATE1O95260 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATE1O95260 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATE1O95260 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATE1O95260 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.16■□□□□ 0.98
ATE1O95260 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATE1O95260 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATE1O95260 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATE1O95260 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATE1O95260 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.15■□□□□ 0.98
ATE1O95260 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
ATE1O95260 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.15■□□□□ 0.98
ATE1O95260 THA1P-201ENST00000590384 1145 ntBASIC21.15■□□□□ 0.98
ATE1O95260 AC018755.3-202ENST00000596210 929 ntBASIC21.15■□□□□ 0.98
ATE1O95260 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
ATE1O95260 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.15■□□□□ 0.98
ATE1O95260 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATE1O95260 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.14■□□□□ 0.98
ATE1O95260 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATE1O95260 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATE1O95260 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATE1O95260 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATE1O95260 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.14■□□□□ 0.97
ATE1O95260 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATE1O95260 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATE1O95260 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.13■□□□□ 0.97
ATE1O95260 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATE1O95260 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATE1O95260 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATE1O95260 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATE1O95260 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATE1O95260 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.13■□□□□ 0.97
ATE1O95260 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATE1O95260 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.12■□□□□ 0.97
ATE1O95260 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATE1O95260 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
ATE1O95260 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATE1O95260 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.12■□□□□ 0.97
ATE1O95260 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.12■□□□□ 0.97
ATE1O95260 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATE1O95260 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATE1O95260 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.12■□□□□ 0.97
ATE1O95260 MIR4508-201ENST00000584178 70 ntBASIC21.12■□□□□ 0.97
ATE1O95260 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATE1O95260 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATE1O95260 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.11■□□□□ 0.97
ATE1O95260 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
ATE1O95260 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.11■□□□□ 0.97
ATE1O95260 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATE1O95260 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATE1O95260 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ATE1O95260 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATE1O95260 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATE1O95260 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATE1O95260 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATE1O95260 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms