Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
RPP40O75818 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.42■■□□□ 1.34
RPP40O75818 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RPP40O75818 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.42■■□□□ 1.34
RPP40O75818 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
RPP40O75818 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.42■■□□□ 1.34
RPP40O75818 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.42■■□□□ 1.34
RPP40O75818 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
RPP40O75818 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.41■■□□□ 1.34
RPP40O75818 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPP40O75818 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 AC093323.1-202ENST00000635031 2045 ntBASIC23.4■■□□□ 1.34
RPP40O75818 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RPP40O75818 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.4■■□□□ 1.34
RPP40O75818 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPP40O75818 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.4■■□□□ 1.34
RPP40O75818 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RPP40O75818 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPP40O75818 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPP40O75818 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.39■■□□□ 1.33
RPP40O75818 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPP40O75818 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPP40O75818 AC090877.2-201ENST00000558441 1738 ntBASIC23.39■■□□□ 1.33
RPP40O75818 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RPP40O75818 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RPP40O75818 LINC01124-201ENST00000409786 2117 ntBASIC23.38■■□□□ 1.33
RPP40O75818 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RPP40O75818 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.38■■□□□ 1.33
RPP40O75818 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.38■■□□□ 1.33
RPP40O75818 AF213884.3-201ENST00000563833 479 ntBASIC23.38■■□□□ 1.33
RPP40O75818 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RPP40O75818 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.38■■□□□ 1.33
RPP40O75818 AL136967.2-201ENST00000623968 743 ntBASIC23.38■■□□□ 1.33
RPP40O75818 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.38■■□□□ 1.33
RPP40O75818 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.38■■□□□ 1.33
RPP40O75818 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPP40O75818 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.38■■□□□ 1.33
RPP40O75818 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPP40O75818 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPP40O75818 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RPP40O75818 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPP40O75818 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPP40O75818 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RPP40O75818 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
RPP40O75818 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RPP40O75818 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.37■■□□□ 1.33
RPP40O75818 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPP40O75818 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPP40O75818 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPP40O75818 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPP40O75818 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPP40O75818 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
RPP40O75818 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPP40O75818 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
RPP40O75818 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RPP40O75818 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.35■■□□□ 1.33
RPP40O75818 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPP40O75818 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RPP40O75818 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.35■■□□□ 1.33
RPP40O75818 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPP40O75818 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RPP40O75818 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.34■■□□□ 1.33
RPP40O75818 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.34■■□□□ 1.33
RPP40O75818 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RPP40O75818 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.34■■□□□ 1.33
RPP40O75818 DUX4L19-201ENST00000557448 1267 ntBASIC23.34■■□□□ 1.33
RPP40O75818 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.34■■□□□ 1.33
RPP40O75818 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.34■■□□□ 1.33
RPP40O75818 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RPP40O75818 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RPP40O75818 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPP40O75818 HLA-L-211ENST00000482052 1765 ntBASIC23.33■■□□□ 1.33
RPP40O75818 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.33■■□□□ 1.33
RPP40O75818 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RPP40O75818 MIR939-201ENST00000401314 82 ntBASIC23.33■■□□□ 1.33
RPP40O75818 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.33■■□□□ 1.33
RPP40O75818 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.33■■□□□ 1.33
RPP40O75818 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.33■■□□□ 1.33
RPP40O75818 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.33■■□□□ 1.33
RPP40O75818 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPP40O75818 LINC00543-201ENST00000567234 1845 ntBASIC23.32■■□□□ 1.32
RPP40O75818 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPP40O75818 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.32■■□□□ 1.32
RPP40O75818 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.32■■□□□ 1.32
RPP40O75818 MIR6821-201ENST00000617625 74 ntBASIC23.32■■□□□ 1.32
RPP40O75818 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.32■■□□□ 1.32
RPP40O75818 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RPP40O75818 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RPP40O75818 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms