Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.41■■■□□ 2.46
MSH5O43196 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MSH5O43196 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MSH5O43196 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
MSH5O43196 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MSH5O43196 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC30.4■■■□□ 2.46
MSH5O43196 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC30.4■■■□□ 2.46
MSH5O43196 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MSH5O43196 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
MSH5O43196 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
MSH5O43196 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
MSH5O43196 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
MSH5O43196 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
MSH5O43196 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
MSH5O43196 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC30.39■■■□□ 2.46
MSH5O43196 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC30.39■■■□□ 2.46
MSH5O43196 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC30.39■■■□□ 2.46
MSH5O43196 AL136162.1-201ENST00000607711 1078 ntBASIC30.39■■■□□ 2.46
MSH5O43196 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
MSH5O43196 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
MSH5O43196 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
MSH5O43196 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
MSH5O43196 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
MSH5O43196 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.38■■■□□ 2.45
MSH5O43196 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
MSH5O43196 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.38■■■□□ 2.45
MSH5O43196 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.38■■■□□ 2.45
MSH5O43196 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.37■■■□□ 2.45
MSH5O43196 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
MSH5O43196 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
MSH5O43196 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC30.37■■■□□ 2.45
MSH5O43196 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC30.37■■■□□ 2.45
MSH5O43196 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MSH5O43196 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MSH5O43196 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MSH5O43196 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
MSH5O43196 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
MSH5O43196 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC30.35■■■□□ 2.45
MSH5O43196 SUDS3P1-201ENST00000505831 966 ntBASIC30.35■■■□□ 2.45
MSH5O43196 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
MSH5O43196 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC30.35■■■□□ 2.45
MSH5O43196 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
MSH5O43196 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
MSH5O43196 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
MSH5O43196 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
MSH5O43196 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
MSH5O43196 TFPT-201ENST00000391757 774 ntTSL 5 BASIC30.34■■■□□ 2.45
MSH5O43196 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
MSH5O43196 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC30.34■■■□□ 2.45
MSH5O43196 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
MSH5O43196 PARL-206ENST00000435888 1098 ntTSL 5 BASIC30.33■■■□□ 2.45
MSH5O43196 AL031432.3-201ENST00000607698 485 ntBASIC30.33■■■□□ 2.45
MSH5O43196 AC011551.1-201ENST00000614101 683 ntBASIC30.33■■■□□ 2.45
MSH5O43196 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.33■■■□□ 2.45
MSH5O43196 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
MSH5O43196 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC30.33■■■□□ 2.45
MSH5O43196 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC30.32■■■□□ 2.45
MSH5O43196 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
MSH5O43196 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
MSH5O43196 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC30.32■■■□□ 2.44
MSH5O43196 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
MSH5O43196 AC009712.1-201ENST00000564938 316 ntBASIC30.31■■■□□ 2.44
MSH5O43196 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
MSH5O43196 AC142381.3-201ENST00000568208 1670 ntBASIC30.3■■■□□ 2.44
MSH5O43196 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
MSH5O43196 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
MSH5O43196 SERPINA7P1-201ENST00000443077 631 ntBASIC30.3■■■□□ 2.44
MSH5O43196 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC30.3■■■□□ 2.44
MSH5O43196 AC138932.3-201ENST00000567634 1902 ntBASIC30.3■■■□□ 2.44
MSH5O43196 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC30.3■■■□□ 2.44
MSH5O43196 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MSH5O43196 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
MSH5O43196 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MSH5O43196 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC30.29■■■□□ 2.44
MSH5O43196 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC30.29■■■□□ 2.44
MSH5O43196 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC30.29■■■□□ 2.44
MSH5O43196 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MSH5O43196 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MSH5O43196 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MSH5O43196 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MSH5O43196 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
MSH5O43196 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
MSH5O43196 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MSH5O43196 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
MSH5O43196 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
MSH5O43196 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC30.28■■■□□ 2.44
MSH5O43196 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MSH5O43196 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
MSH5O43196 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MSH5O43196 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MSH5O43196 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MSH5O43196 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC30.27■■■□□ 2.44
MSH5O43196 AC105265.2-201ENST00000467189 838 ntBASIC30.27■■■□□ 2.44
MSH5O43196 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC30.27■■■□□ 2.44
MSH5O43196 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MSH5O43196 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC30.27■■■□□ 2.44
MSH5O43196 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
MSH5O43196 ANKRD20A6P-201ENST00000618763 204 ntBASIC30.27■■■□□ 2.44
MSH5O43196 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
MSH5O43196 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms