Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCL21O00585 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCL21O00585 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CCL21O00585 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.23■□□□□ 0.83
CCL21O00585 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL21O00585 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL21O00585 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL21O00585 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL21O00585 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.23■□□□□ 0.83
CCL21O00585 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCL21O00585 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCL21O00585 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL21O00585 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL21O00585 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL21O00585 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL21O00585 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CCL21O00585 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.22■□□□□ 0.83
CCL21O00585 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.22■□□□□ 0.83
CCL21O00585 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL21O00585 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL21O00585 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.22■□□□□ 0.83
CCL21O00585 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCL21O00585 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCL21O00585 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL21O00585 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCL21O00585 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL21O00585 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.21■□□□□ 0.83
CCL21O00585 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.21■□□□□ 0.83
CCL21O00585 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.21■□□□□ 0.83
CCL21O00585 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.21■□□□□ 0.83
CCL21O00585 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCL21O00585 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL21O00585 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CCL21O00585 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCL21O00585 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CCL21O00585 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCL21O00585 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCL21O00585 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL21O00585 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL21O00585 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 AC090192.1-201ENST00000517740 490 ntBASIC20.2■□□□□ 0.82
CCL21O00585 MIR6089-201ENST00000616698 64 ntBASIC20.2■□□□□ 0.82
CCL21O00585 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCL21O00585 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCL21O00585 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.2■□□□□ 0.82
CCL21O00585 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL21O00585 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.19■□□□□ 0.82
CCL21O00585 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.19■□□□□ 0.82
CCL21O00585 pRNA.6-201ENST00000610482 90 ntBASIC20.19■□□□□ 0.82
CCL21O00585 pRNA.5-201ENST00000612139 90 ntBASIC20.19■□□□□ 0.82
CCL21O00585 pRNA.11-201ENST00000618423 90 ntBASIC20.19■□□□□ 0.82
CCL21O00585 pRNA.13-201ENST00000619112 90 ntBASIC20.19■□□□□ 0.82
CCL21O00585 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CCL21O00585 RARRES2P11-201ENST00000635158 484 ntBASIC20.19■□□□□ 0.82
CCL21O00585 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL21O00585 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCL21O00585 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.19■□□□□ 0.82
CCL21O00585 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCL21O00585 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.19■□□□□ 0.82
CCL21O00585 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCL21O00585 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL21O00585 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCL21O00585 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL21O00585 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
CCL21O00585 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCL21O00585 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.18■□□□□ 0.82
CCL21O00585 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCL21O00585 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.18■□□□□ 0.82
CCL21O00585 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCL21O00585 AC022517.1-201ENST00000592429 346 ntBASIC20.18■□□□□ 0.82
CCL21O00585 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CCL21O00585 AL137784.2-201ENST00000607332 1000 ntBASIC20.18■□□□□ 0.82
CCL21O00585 IKBKGP1-201ENST00000612193 1073 ntBASIC20.18■□□□□ 0.82
CCL21O00585 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.18■□□□□ 0.82
CCL21O00585 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.18■□□□□ 0.82
CCL21O00585 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCL21O00585 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCL21O00585 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.18■□□□□ 0.82
CCL21O00585 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL21O00585 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL21O00585 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.17■□□□□ 0.82
CCL21O00585 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCL21O00585 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL21O00585 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.17■□□□□ 0.82
CCL21O00585 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.17■□□□□ 0.82
CCL21O00585 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCL21O00585 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CCL21O00585 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.16■□□□□ 0.82
CCL21O00585 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL21O00585 YBX1P1-201ENST00000445822 960 ntBASIC20.16■□□□□ 0.82
CCL21O00585 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.16■□□□□ 0.82
CCL21O00585 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.16■□□□□ 0.82
CCL21O00585 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CCL21O00585 TSPY26P-201ENST00000476365 1326 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms