Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
TCRBV9S1A1TA0A576 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 AC011551.1-201ENST00000614101 683 ntBASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 AC131274.2-201ENST00000580697 1507 ntBASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 C1orf229-201ENST00000623686 2258 ntBASIC22.96■■□□□ 1.27
TCRBV9S1A1TA0A576 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TCRBV9S1A1TA0A576 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TCRBV9S1A1TA0A576 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TCRBV9S1A1TA0A576 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 KRT18P60-201ENST00000312876 1297 ntBASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 ALDH1A3-203ENST00000557963 1670 ntBASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TCRBV9S1A1TA0A576 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
TCRBV9S1A1TA0A576 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.91■■□□□ 1.26
TCRBV9S1A1TA0A576 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
TCRBV9S1A1TA0A576 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
TCRBV9S1A1TA0A576 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
TCRBV9S1A1TA0A576 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
TCRBV9S1A1TA0A576 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV9S1A1TA0A576 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV9S1A1TA0A576 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.89■■□□□ 1.26
TCRBV9S1A1TA0A576 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV9S1A1TA0A576 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
TCRBV9S1A1TA0A576 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 HSD17B1P1-201ENST00000590052 955 ntBASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TCRBV9S1A1TA0A576 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
TCRBV9S1A1TA0A576 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms