Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC016575.1-201ENST00000607026 382 ntBASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TRBV6-1A0A0K0K1D8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV6-1A0A0K0K1D8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV6-1A0A0K0K1D8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV6-1A0A0K0K1D8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV6-1A0A0K0K1D8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 AL022069.1-201ENST00000568025 1636 ntBASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV6-1A0A0K0K1D8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.04■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.03■□□□□ 0.32
TRBV6-1A0A0K0K1D8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms