Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 AL161729.1-201ENST00000604104 1402 ntBASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV12-3A0A0B4J271 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV12-3A0A0B4J271 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 AC133561.1-201ENST00000568600 2415 ntBASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 AC010980.1-201ENST00000587192 1142 ntBASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 AC074183.2-201ENST00000623112 922 ntBASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRAV12-3A0A0B4J271 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV12-3A0A0B4J271 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 AC120024.1-201ENST00000562672 995 ntBASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC16.83■□□□□ 0.28
TRAV12-3A0A0B4J271 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 PVT1_1.1-201ENST00000615125 194 ntBASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 AC012354.3-201ENST00000623734 483 ntBASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV12-3A0A0B4J271 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV12-3A0A0B4J271 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms