Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 AC006077.2-201ENST00000623591 457 ntBASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV20-1A0A075B6N2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV20-1A0A075B6N2 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV20-1A0A075B6N2 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRBV20-1A0A075B6N2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRBV20-1A0A075B6N2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV20-1A0A075B6N2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.21■□□□□ 0.03
TRBV20-1A0A075B6N2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRBV20-1A0A075B6N2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV20-1A0A075B6N2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRBV20-1A0A075B6N2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRBV20-1A0A075B6N2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
TRBV20-1A0A075B6N2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV20-1A0A075B6N2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV20-1A0A075B6N2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV20-1A0A075B6N2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRBV20-1A0A075B6N2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC15.21■□□□□ 0.02
TRBV20-1A0A075B6N2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV20-1A0A075B6N2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms