Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 AC007274.1-201ENST00000439805 662 ntBASIC12.53□□□□□ -0.4
CLN8Q9UBY8 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CLN8Q9UBY8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 AC018442.1-201ENST00000421439 2061 ntBASIC12.52□□□□□ -0.4
CLN8Q9UBY8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CLN8Q9UBY8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 FTLP10-202ENST00000505798 471 ntBASIC12.52□□□□□ -0.41
CLN8Q9UBY8 AC026434.2-201ENST00000506094 1078 ntBASIC12.52□□□□□ -0.41
CLN8Q9UBY8 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CLN8Q9UBY8 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLN8Q9UBY8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms