Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 TCAM1P-207ENST00000485295 1537 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 METTL21AP1-201ENST00000438852 635 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AL158211.3-201ENST00000607385 239 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AL390754.1-201ENST00000619088 582 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AC073548.1-201ENST00000624088 1882 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 INE2-201ENST00000630399 1874 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 KRT18P28-201ENST00000453838 1332 ntBASIC12.84□□□□□ -0.35
CCDC107Q8WV48 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CCDC107Q8WV48 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CCDC107Q8WV48 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.83□□□□□ -0.35
CCDC107Q8WV48 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CCDC107Q8WV48 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AC241585.1-201ENST00000433527 519 ntBASIC12.83□□□□□ -0.36
CCDC107Q8WV48 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AL645728.2-202ENST00000641679 227 ntBASIC12.83□□□□□ -0.36
CCDC107Q8WV48 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
CCDC107Q8WV48 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCDC107Q8WV48 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms