Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 AC084346.2-201ENST00000607097 949 ntBASIC14.67□□□□□ -0.06
CHD5Q8TDI0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 INTS4P1-203ENST00000641008 3683 ntBASIC14.67□□□□□ -0.06
CHD5Q8TDI0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 TCAM1P-207ENST00000485295 1537 ntBASIC14.67□□□□□ -0.06
CHD5Q8TDI0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 AL161670.2-201ENST00000557650 1227 ntBASIC14.67□□□□□ -0.06
CHD5Q8TDI0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHD5Q8TDI0 LINC01815-202ENST00000641468 1409 ntBASIC14.67□□□□□ -0.06
CHD5Q8TDI0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AL157791.1-201ENST00000553667 1699 ntBASIC14.66□□□□□ -0.06
CHD5Q8TDI0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AC090643.2-201ENST00000623442 2029 ntBASIC14.66□□□□□ -0.06
CHD5Q8TDI0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AL021578.1-201ENST00000613646 709 ntBASIC14.66□□□□□ -0.06
CHD5Q8TDI0 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHD5Q8TDI0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 OR8T1P-201ENST00000421347 918 ntBASIC14.65□□□□□ -0.06
CHD5Q8TDI0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.65□□□□□ -0.06
CHD5Q8TDI0 AC093752.3-201ENST00000567343 901 ntBASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms