Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XRN1Q8IZH2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 HNRNPA3P6-201ENST00000472163 1006 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AC100858.1-201ENST00000514059 1228 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 CR392039.1-201ENST00000623217 204 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AC008536.3-201ENST00000623282 1599 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 VDAC1P11-201ENST00000458323 852 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AC132825.4-202ENST00000578792 434 ntBASIC19.68■□□□□ 0.74
XRN1Q8IZH2 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.68■□□□□ 0.74
XRN1Q8IZH2 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 AC103563.1-201ENST00000429316 123 ntBASIC19.67■□□□□ 0.74
XRN1Q8IZH2 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 DUT-207ENST00000559416 635 ntTSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 MT3-202ENST00000561640 514 ntTSL 3 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 AC080013.5-201ENST00000607044 679 ntBASIC19.67■□□□□ 0.74
XRN1Q8IZH2 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC19.67■□□□□ 0.74
XRN1Q8IZH2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 WASH7P-201ENST00000488147 1351 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 RNA5SP491-201ENST00000362936 118 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 VENTXP4-201ENST00000449029 958 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 AL512310.5-201ENST00000551999 515 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 HNRNPA1P16-201ENST00000575692 955 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 AGAP7P-201ENST00000582299 2062 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 AGAP14-201ENST00000624701 2060 ntBASIC19.66■□□□□ 0.74
XRN1Q8IZH2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.66■□□□□ 0.74
XRN1Q8IZH2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XRN1Q8IZH2 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms