Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AKAP8P1-201ENST00000434743 1349 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AC011498.7-201ENST00000624986 2027 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 AC215219.1-201ENST00000400706 1817 ntBASIC12.3□□□□□ -0.44
ZNF546Q86UE3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF546Q86UE3 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AC024075.2-201ENST00000598112 1473 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 HLA-H-201ENST00000383620 1096 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 FAAHP1-202ENST00000446499 1238 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 IGHV3-22-201ENST00000520721 359 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AC025181.2-201ENST00000606994 802 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 AC008267.7-201ENST00000624570 1194 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 HSPA8P5-201ENST00000456928 2069 ntBASIC12.29□□□□□ -0.44
ZNF546Q86UE3 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF546Q86UE3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF546Q86UE3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms