Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
USP50Q70EL3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.94■□□□□ 0.3
USP50Q70EL3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.94■□□□□ 0.3
USP50Q70EL3 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.94■□□□□ 0.3
USP50Q70EL3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.94■□□□□ 0.3
USP50Q70EL3 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 KRT8P30-201ENST00000432100 650 ntBASIC16.94■□□□□ 0.3
USP50Q70EL3 AC092903.1-201ENST00000466506 262 ntBASIC16.94■□□□□ 0.3
USP50Q70EL3 RPS18P9-201ENST00000482817 460 ntBASIC16.94■□□□□ 0.3
USP50Q70EL3 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.94■□□□□ 0.3
USP50Q70EL3 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC16.94■□□□□ 0.3
USP50Q70EL3 AC004801.1-201ENST00000549557 360 ntBASIC16.94■□□□□ 0.3
USP50Q70EL3 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC16.94■□□□□ 0.3
USP50Q70EL3 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.94■□□□□ 0.3
USP50Q70EL3 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.94■□□□□ 0.3
USP50Q70EL3 AL136982.5-201ENST00000605222 294 ntBASIC16.94■□□□□ 0.3
USP50Q70EL3 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.94■□□□□ 0.3
USP50Q70EL3 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC16.94■□□□□ 0.3
USP50Q70EL3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
USP50Q70EL3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
USP50Q70EL3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
USP50Q70EL3 OR10N1P-201ENST00000392758 869 ntBASIC16.93■□□□□ 0.3
USP50Q70EL3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.93■□□□□ 0.3
USP50Q70EL3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.93■□□□□ 0.3
USP50Q70EL3 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.93■□□□□ 0.3
USP50Q70EL3 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
USP50Q70EL3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.93■□□□□ 0.3
USP50Q70EL3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
USP50Q70EL3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
USP50Q70EL3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USP50Q70EL3 EEF1DP5-201ENST00000431410 772 ntBASIC16.92■□□□□ 0.3
USP50Q70EL3 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.92■□□□□ 0.3
USP50Q70EL3 CDCA4P4-201ENST00000435216 680 ntBASIC16.92■□□□□ 0.3
USP50Q70EL3 STK24P1-201ENST00000455035 1291 ntBASIC16.92■□□□□ 0.3
USP50Q70EL3 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USP50Q70EL3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.92■□□□□ 0.3
USP50Q70EL3 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
USP50Q70EL3 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.92■□□□□ 0.3
USP50Q70EL3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC16.92■□□□□ 0.3
USP50Q70EL3 AC019294.2-203ENST00000569596 594 ntTSL 3 BASIC16.92■□□□□ 0.3
USP50Q70EL3 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC16.92■□□□□ 0.3
USP50Q70EL3 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.92■□□□□ 0.3
USP50Q70EL3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC16.92■□□□□ 0.3
USP50Q70EL3 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
USP50Q70EL3 AC139713.2-207ENST00000641556 1292 ntBASIC16.92■□□□□ 0.3
USP50Q70EL3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
USP50Q70EL3 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
USP50Q70EL3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms