Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CASC4Q6P4E1 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 AC092135.3-201ENST00000624151 1846 ntBASIC15.1■□□□□ 0.01
CASC4Q6P4E1 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 ENPP7P5-201ENST00000541031 1031 ntBASIC15.1■□□□□ 0.01
CASC4Q6P4E1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 AC008494.3-201ENST00000606615 944 ntBASIC15.1■□□□□ 0.01
CASC4Q6P4E1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 CU634019.7-201ENST00000624153 1185 ntBASIC15.1■□□□□ 0.01
CASC4Q6P4E1 FP236241.2-201ENST00000624906 1185 ntBASIC15.1■□□□□ 0.01
CASC4Q6P4E1 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 KRT8P35-201ENST00000483942 1338 ntBASIC15.1■□□□□ 0.01
CASC4Q6P4E1 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CASC4Q6P4E1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ACTBP8-201ENST00000403258 1108 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 TLE1P1-201ENST00000422965 589 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 AL162726.2-201ENST00000438986 1017 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 FO681548.1-201ENST00000455617 1132 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ELK1P1-201ENST00000485699 580 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 AP001063.1-201ENST00000568332 529 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 AC027796.2-201ENST00000575326 344 ntBASIC15.09■□□□□ 0.01
CASC4Q6P4E1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC15.09■□□□□ 0.01
CASC4Q6P4E1 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms