Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AP001059.3-201ENST00000619053 235 ntBASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 OS9-218ENST00000551035 2246 ntTSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ANKRD55Q3KP44 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 BEND3P3-201ENST00000611030 2440 ntBASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SERBP1P3-201ENST00000459980 809 ntBASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 AL512356.2-201ENST00000546955 174 ntBASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 HAL-202ENST00000538703 2637 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 AL158070.2-201ENST00000623713 1621 ntBASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
ANKRD55Q3KP44 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ANKRD55Q3KP44 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms